STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK08026.1MerR family transcriptional regulator, mercuric resistance operon regulatory protein. (140 aa)    
Predicted Functional Partners:
SEK08031.1
Mercuric ion transport protein.
 
  
 0.816
SEK01579.1
Glutamate synthase (NADPH) large subunit.
    
  0.794
SEK08046.1
Mercuric reductase.
 
   
 0.655
SEJ34270.1
Hypothetical protein.
   
 
 0.650
SEK08036.1
Mercuric ion binding protein.
  
  
 0.640
SEJ53463.1
methylmalonyl-CoA mutase.
     
 0.622
SEJ88731.1
(R)-ethylmalonyl-CoA mutase.
     
 0.622
SEJ39507.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
  0.604
SEJ69241.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
  0.604
SEI78604.1
DnaJ domain-containing protein.
  
 
 0.571
Your Current Organism:
Cribrihabitans marinus
NCBI taxonomy Id: 1227549
Other names: C. marinus, CGMCC 1.13219, Cribrihabitans marinus Chen et al. 2014, DSM 29340, JCM 19401, Phaeobacter sp. CZ-AM5, strain CZ-AM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.