STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT34327.1Arabinose efflux permease; IMG gene_oid=2534654496. (364 aa)    
Predicted Functional Partners:
AKT34328.1
Carbamate kinase; IMG gene_oid=2534654497; Belongs to the carbamate kinase family.
       0.768
gap
IMG gene_oid=2534654594; glyceraldehyde 3-phosphate dehydrogenase (NAD(P)+) (EC 1.2.1.59).
 
 
 0.672
AKT34326.1
Hypothetical protein; IMG gene_oid=2534654495.
       0.655
AKT34336.1
IMG gene_oid=2534654505; nucleoside diphosphate kinase (EC 2.7.4.6).
  
 
  0.555
tdk
Thymidine kinase; IMG gene_oid=2534655053; thymidine kinase (EC 2.7.1.21).
     
 0.553
AKT34325.1
Hypothetical protein; IMG gene_oid=2534654494.
       0.484
AKT34186.1
Small-conductance mechanosensitive channel; IMG gene_oid=2534654350.
 
     0.416
Your Current Organism:
Pyrobaculum sp. WP30
NCBI taxonomy Id: 1227555
Other names: P. sp. WP30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.