STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT35395.1Sortase and related acyltransferase; IMG gene_oid=2534655594. (175 aa)    
Predicted Functional Partners:
AKT34446.1
4-aminobutyrate aminotransferase apoenzyme; IMG gene_oid=2534654620; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.806
AKT35396.1
Aldo/keto reductase, related to diketogulonate reductase; IMG gene_oid=2534655595.
  
    0.795
AKT35628.1
Cupin domain; IMG gene_oid=2534655827.
  
 
 0.766
hisH
Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
    
  0.748
hisF
Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
    
  0.742
AKT35394.1
Hypothetical protein; IMG gene_oid=2534655593.
       0.697
cysS
IMG gene_oid=2534653883; cysteinyl-tRNA synthetase (EC 6.1.1.16).
    
 0.689
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
    
  0.677
AKT35393.1
Hypothetical protein; IMG gene_oid=2534655592.
       0.674
AKT34180.1
Acyl-CoA dehydrogenase; IMG gene_oid=2534654343.
   
 
 0.586
Your Current Organism:
Pyrobaculum sp. WP30
NCBI taxonomy Id: 1227555
Other names: P. sp. WP30
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