STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKT35582.1ABC-type spermidine/putrescine transport system, permease component II; IMG gene_oid=2534655781. (253 aa)    
Predicted Functional Partners:
AKT33823.1
Spermidine/putrescine-binding periplasmic protein; IMG gene_oid=2534653967.
 
 0.999
AKT35583.1
ABC-type spermidine/putrescine transport system, permease component I; IMG gene_oid=2534655782.
 
 
 0.999
AKT35584.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG gene_oid=2534655783.
 
 
 0.992
AKT35690.1
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component; IMG gene_oid=2534655891.
    
 0.802
AKT34758.1
ABC-type Fe3+ transport system, permease component; IMG gene_oid=2534654942.
 
  
  0.786
AKT34252.1
Tungstate/molybdate transport system permease protein; IMG gene_oid=2534654420.
  
 
  0.772
AKT34759.1
ABC-type spermidine/putrescine transport system, ATPase component; IMG gene_oid=2534654943.
 
  
  0.772
AKT35693.1
ABC-type Fe3+ transport system, permease component; IMG gene_oid=2534655894.
 
  
  0.711
AKT34165.1
ABC-type cobalt transport system, ATPase component; IMG gene_oid=2534654328.
   
  
 0.705
AKT34076.1
ABC-type sugar transport system, ATPase component; IMG gene_oid=2534654235.
 
  
  0.700
Your Current Organism:
Pyrobaculum sp. WP30
NCBI taxonomy Id: 1227555
Other names: P. sp. WP30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.