STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hsw_0780Adenylate/guanylate cyclase; COG2114. (348 aa)    
Predicted Functional Partners:
Hsw_0782
Histidine kinase; COG4191.
 
 
 0.929
Hsw_4158
Hypothetical protein; COG1409.
     
 0.912
Hsw_4160
Hypothetical protein; COG1409.
     
 0.912
Hsw_0742
Pyruvate kinase; COG0469; Belongs to the pyruvate kinase family.
   
 0.909
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.908
Hsw_3030
(p)ppGpp synthetase I; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.905
Hsw_0781
Response regulator receiver protein; COG2204.
 
 
0.852
Hsw_1671
Histidine kinase; COG0642.
 
 
 0.832
Hsw_2250
Histidine kinase; COG4191.
 
 
 
 0.830
Hsw_2899
Histidine kinase; COG4191.
 
 
 0.827
Your Current Organism:
Hymenobacter swuensis
NCBI taxonomy Id: 1227739
Other names: H. swuensis DY53, Hymenobacter sp. DY53, Hymenobacter swuensis DY53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.