STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hsw_4181Hypothetical protein. (232 aa)    
Predicted Functional Partners:
Hsw_2912
Hypothetical protein.
  
     0.589
Hsw_4180
Hypothetical protein.
       0.578
Hsw_4179
Hypothetical protein.
       0.450
Hsw_4178
Hypothetical protein; COG3236.
 
     0.435
ddl
D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
     0.428
Hsw_3272
Hypothetical protein.
  
     0.425
Hsw_0516
Hypothetical protein.
  
     0.422
Hsw_3432
Hypothetical protein.
  
 
   0.403
Your Current Organism:
Hymenobacter swuensis
NCBI taxonomy Id: 1227739
Other names: H. swuensis DY53, Hymenobacter sp. DY53, Hymenobacter swuensis DY53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.