STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFT86167.1Peroxiredoxin, Ohr subfamily; Identified by sequence similarity; putative. (141 aa)    
Predicted Functional Partners:
AFT84552.1
Starvation-inducible DNA-binding protein; Identified by sequence similarity; putative; Belongs to the Dps family.
  
  
 0.471
AFT86168.1
Regulatory protein TetR; Identified by sequence similarity; putative.
       0.451
AFT87744.1
Multi-sensor hybrid histidine kinase; Identified by sequence similarity; putative.
  
  
 0.419
AFT84551.1
Catalase; Identified by sequence similarity; putative; Belongs to the catalase family.
  
  
 0.419
AFT87971.1
Histidine kinase; Identified by sequence similarity; putative.
   
  
 0.409
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.