STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFT89460.1ABC-2 type transport system ATP-binding protein; Identified by sequence similarity; putative. (314 aa)    
Predicted Functional Partners:
AFT89459.1
Antibiotic transport system permease protein; Identified by sequence similarity; putative.
  
 0.996
AFT89461.1
HlyD family secretion protein; Identified by sequence similarity; putative.
  
 0.963
AFT89458.1
NodT family RND efflux system, outer membrane lipoprotein; Identified by sequence similarity; putative.
 
   
 0.817
AFT89462.1
Transcriptional regulator TetR; Identified by sequence similarity; putative.
     
 0.552
AFT89812.1
Ca2+-transporting ATPase; Identified by sequence similarity; putative.
 
 0.478
atpD
F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.473
AFT87860.1
PadR-like family transcriptional regulator; Identified by sequence similarity; putative.
 
  
 0.454
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.453
AFT85911.1
Lipooligosaccharide transport system permease protein; Identified by sequence similarity; putative.
  
  
 0.417
atpG
F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.416
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.