STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DI53_0334Cystathionine gamma-lyase. (380 aa)    
Predicted Functional Partners:
DI53_0483
Cysteine synthase.
 
 0.972
DI53_2386
Bifunctional aspartokinase I/homoserine dehydrogenase I.
  
 
 0.892
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.863
DI53_1869
Cysteine synthase.
  
 0.861
DI53_2494
Cystathionine beta-synthase.
 
 0.846
DI53_2169
Methylenetetrahydrofolate reductase (NAD(P)H); Belongs to the methylenetetrahydrofolate reductase family.
  
 0.840
DI53_2471
Putative cysteine synthase.
 
 0.789
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
 
 0.770
DI53_3218
O-acetylhomoserine sulfhydrylase.
 
 
0.755
DI53_3474
ferredoxiN--nitrite reductase.
  
 
 0.741
Your Current Organism:
Sphingobacterium deserti
NCBI taxonomy Id: 1229276
Other names: ACCC 05744, KCTC 32092, S. deserti, Sphingobacterium sp. ACCC 05744, Sphingobacterium sp. ZW, strain ZW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.