Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DI53_2114 | DI53_2625 | DI53_2114 | DI53_2625 | Amidohydrolase. | Carboxylyase-related protein; Belongs to the UbiD family. | 0.587 |
DI53_2114 | DI53_3084 | DI53_2114 | DI53_3084 | Amidohydrolase. | Radical SAM domain protein. | 0.984 |
DI53_2114 | DI53_3525 | DI53_2114 | DI53_3525 | Amidohydrolase. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.737 |
DI53_2114 | mqnA | DI53_2114 | DI53_3086 | Amidohydrolase. | Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.777 |
DI53_2114 | mqnB | DI53_2114 | DI53_1553 | Amidohydrolase. | Purine or other phosphorylase family 1; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.983 |
DI53_2114 | mqnD | DI53_2114 | DI53_1722 | Amidohydrolase. | Protein of unknown function DUF191; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.728 |
DI53_2625 | DI53_2114 | DI53_2625 | DI53_2114 | Carboxylyase-related protein; Belongs to the UbiD family. | Amidohydrolase. | 0.587 |
DI53_2625 | DI53_3084 | DI53_2625 | DI53_3084 | Carboxylyase-related protein; Belongs to the UbiD family. | Radical SAM domain protein. | 0.773 |
DI53_2625 | DI53_3525 | DI53_2625 | DI53_3525 | Carboxylyase-related protein; Belongs to the UbiD family. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.989 |
DI53_2625 | mqnA | DI53_2625 | DI53_3086 | Carboxylyase-related protein; Belongs to the UbiD family. | Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.806 |
DI53_2625 | mqnB | DI53_2625 | DI53_1553 | Carboxylyase-related protein; Belongs to the UbiD family. | Purine or other phosphorylase family 1; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.780 |
DI53_2625 | mqnD | DI53_2625 | DI53_1722 | Carboxylyase-related protein; Belongs to the UbiD family. | Protein of unknown function DUF191; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.793 |
DI53_3084 | DI53_2114 | DI53_3084 | DI53_2114 | Radical SAM domain protein. | Amidohydrolase. | 0.984 |
DI53_3084 | DI53_2625 | DI53_3084 | DI53_2625 | Radical SAM domain protein. | Carboxylyase-related protein; Belongs to the UbiD family. | 0.773 |
DI53_3084 | DI53_3085 | DI53_3084 | DI53_3085 | Radical SAM domain protein. | Phosphoglycerate mutase. | 0.826 |
DI53_3084 | DI53_3099 | DI53_3084 | DI53_3099 | Radical SAM domain protein. | Thiamine biosynthesis protein ThiS. | 0.769 |
DI53_3084 | DI53_3525 | DI53_3084 | DI53_3525 | Radical SAM domain protein. | 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family. | 0.805 |
DI53_3084 | mqnA | DI53_3084 | DI53_3086 | Radical SAM domain protein. | Protein of unknown function DUF178; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.998 |
DI53_3084 | mqnB | DI53_3084 | DI53_1553 | Radical SAM domain protein. | Purine or other phosphorylase family 1; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.870 |
DI53_3084 | mqnD | DI53_3084 | DI53_1722 | Radical SAM domain protein. | Protein of unknown function DUF191; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.883 |
page 1 of 3