STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kshB3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component. (366 aa)    
Predicted Functional Partners:
nuoC
NADH-quinone oxidoreductase subunit C/D.
  
 0.999
antA_2
Anthranilate 1,2-dioxygenase large subunit.
 
 0.992
soxA_2
Sarcosine oxidase subunit alpha.
 
 0.984
soxA_4
Sarcosine oxidase subunit alpha.
 
 0.980
nuoB
NADH-quinone oxidoreductase subunit B.
  
  0.965
nuoN
NADH-quinone oxidoreductase subunit N.
   
 0.963
nuoH
NADH-quinone oxidoreductase subunit H.
  
 0.963
lgrD_4
Linear gramicidin synthase subunit D.
   
 0.952
nuoI
NADH-quinone oxidoreductase subunit I.
  
 0.941
nuoF
NADH-quinone oxidoreductase subunit F.
  
 0.941
Your Current Organism:
gamma proteobacterium L18
NCBI taxonomy Id: 1229486
Other names: g. proteobacterium L18
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