STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_15073mRNA_triPase domain-containing protein. (911 aa)    
Predicted Functional Partners:
PFICI_03431
mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family.
    
 0.997
PFICI_05802
TYR_PHOSPHATASE_2 domain-containing protein.
    
 0.903
PFICI_15164
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
   
 
 0.770
PFICI_11215
Uncharacterized protein.
   
 0.745
PFICI_13981
mRNA cap guanine-N7 methyltransferase.
   
  
 0.661
PFICI_06934
Uncharacterized protein.
    
 0.658
PFICI_12338
TFIID_20kDa domain-containing protein.
    
 0.655
PFICI_11003
Uncharacterized protein.
   
 0.649
PFICI_13005
SCA7 domain-containing protein.
    
 0.648
PFICI_09600
TAF domain-containing protein.
    
 0.641
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (24%) [HD]