STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_15129NmrA domain-containing protein. (319 aa)    
Predicted Functional Partners:
PFICI_15130
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.873
PFICI_02649
Uncharacterized protein.
 
      0.750
PFICI_12798
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.723
PFICI_13235
NmrA domain-containing protein.
  
 
   0.507
PFICI_01617
NmrA domain-containing protein.
  
 
  0.462
PFICI_05121
NmrA domain-containing protein.
  
     0.452
PFICI_03863
NmrA domain-containing protein.
  
 
  0.447
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.