STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_15062Uncharacterized protein. (381 aa)    
Predicted Functional Partners:
PFICI_00710
Uncharacterized protein.
   
 
 0.794
PFICI_07257
N-acetyltransferase domain-containing protein.
   
 
 0.758
PFICI_06152
SGF29 C-terminal domain-containing protein.
   
 0.727
PFICI_06241
Uncharacterized protein.
    
 0.577
PFICI_13280
Isochorismatase domain-containing protein.
    
   0.443
PFICI_04624
Pre-mRNA-splicing factor cef-1.
    
   0.443
PFICI_11911
60S ribosomal protein L25-A.
   
   0.436
PFICI_11218
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.410
PFICI_11860
Translation initiation factor RLI1.
   
    0.400
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.