STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_14665Zn(2)-C6 fungal-type domain-containing protein. (598 aa)    
Predicted Functional Partners:
PFICI_04508
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.742
PFICI_01231
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.742
PFICI_07081
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.665
PFICI_12609
RING-box protein 1A.
    
 0.548
PFICI_11336
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
 0.471
PFICI_11545
BRCT domain-containing protein.
    
   0.454
PFICI_01369
26S protease regulatory subunit 7; Belongs to the AAA ATPase family.
   
 0.440
PFICI_09064
26S proteasome regulatory subunit rpn-8.
   
 
 0.432
PFICI_14813
Ubiquitin-40S ribosomal protein S27a.
    
 0.404
PFICI_10257
BZIP domain-containing protein.
    
 0.404
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.