STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_14129Eukaryotic translation initiation factor 1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (155 aa)    
Predicted Functional Partners:
PFICI_12961
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.999
PFICI_09060
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
PFICI_07863
40S ribosomal protein S29.
  
 0.999
PFICI_06825
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
PFICI_05866
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.999
PFICI_03228
40S ribosomal protein S20.
  
 0.999
PFICI_01804
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.998
PFICI_05318
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
  
 0.998
PFICI_02012
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.998
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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