STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_14851Lactamase_B domain-containing protein. (366 aa)    
Predicted Functional Partners:
PFICI_00334
YTH domain-containing protein.
    
 0.995
PFICI_06955
Protein cft-1.
   
 0.852
PFICI_01180
DUF3453 domain-containing protein.
   
 0.836
PFICI_07343
ATP-dependent DNA helicase II subunit 2.
    
 0.831
PFICI_04679
ATP-dependent DNA helicase II subunit 1.
   
 0.781
PFICI_14586
Fip1 domain-containing protein.
    
 0.767
PFICI_15021
CID domain-containing protein.
    
 0.737
PFICI_13687
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.700
PFICI_07016
Uncharacterized protein.
    
 0.681
PFICI_14546
DNA ligase.
   
 0.646
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.