STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_15026GRIP domain-containing protein. (545 aa)    
Predicted Functional Partners:
PFICI_04907
Uncharacterized protein.
   
 
 0.963
PFICI_15113
Uncharacterized protein.
  
 
 0.960
PFICI_11502
DNA-directed RNA polymerase.
  
  
 0.916
PFICI_08212
Ubiquitin-related modifier 1; Belongs to the URM1 family.
    
 0.913
PFICI_04999
GMP synthase.
  
 
 0.830
PFICI_09622
Nucleoside diphosphate kinase.
  
 0.816
PFICI_08052
CASP_C domain-containing protein.
    
 
 0.807
PFICI_14148
Flavoprotein domain-containing protein.
  
 
 0.804
PFICI_06137
Flavoprotein domain-containing protein.
  
 
 0.804
PFICI_02858
Uncharacterized protein.
    
 0.793
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.