STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_14295Uncharacterized protein. (760 aa)    
Predicted Functional Partners:
PFICI_10152
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
  
0.999
PFICI_14430
MPN domain-containing protein.
    
 0.991
PFICI_14182
Polyubiquitin.
    
 0.947
PFICI_02205
Uncharacterized protein.
   
 0.938
PFICI_10153
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 0.895
PFICI_06962
Uncharacterized protein.
   
 0.876
PFICI_10338
Uncharacterized protein.
     
 0.852
PFICI_14813
Ubiquitin-40S ribosomal protein S27a.
   
 0.832
PFICI_10257
BZIP domain-containing protein.
   
 0.832
PFICI_01936
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.829
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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