PFICI_14547 protein (Pestalotiopsis fici) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PFICI_14547

Uncharacterized protein. (225 aa)

Predicted Functional Partners:

PFICI_01750

0.931

PFICI_12103

0.930

PFICI_01549

0.929

PFICI_01850

0.923

PFICI_14552

0.918

PFICI_11454

0.915

PFICI_06155

0.910

PFICI_05697

0.906

PFICI_00686

0.904

PFICI_00829

0.900

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFICI_00686	PFICI_01549	W3XLB2	W3XR95	SurE domain-containing protein.	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	0.900
PFICI_00686	PFICI_01850	W3XLB2	W3XR78	SurE domain-containing protein.	IU_nuc_hydro domain-containing protein.	0.900
PFICI_00686	PFICI_05697	W3XLB2	W3XF56	SurE domain-containing protein.	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.	0.900
PFICI_00686	PFICI_06155	W3XLB2	W3X4V3	SurE domain-containing protein.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.900
PFICI_00686	PFICI_11454	W3XLB2	W3WUR4	SurE domain-containing protein.	Orotidine 5'-phosphate decarboxylase.	0.900
PFICI_00686	PFICI_12103	W3XLB2	W3WV46	SurE domain-containing protein.	Uracil phosphoribosyltransferase.	0.900
PFICI_00686	PFICI_14547	W3XLB2	W3WLB3	SurE domain-containing protein.	Uncharacterized protein.	0.904
PFICI_00686	PFICI_14552	W3XLB2	W3WLB8	SurE domain-containing protein.	Uridine kinase; Belongs to the uridine kinase family.	0.900
PFICI_00829	PFICI_01750	W3XNZ4	W3XQX9	Uncharacterized protein.	Cytosine deaminase.	0.900
PFICI_00829	PFICI_01850	W3XNZ4	W3XR78	Uncharacterized protein.	IU_nuc_hydro domain-containing protein.	0.906
PFICI_00829	PFICI_12103	W3XNZ4	W3WV46	Uncharacterized protein.	Uracil phosphoribosyltransferase.	0.900
PFICI_00829	PFICI_14547	W3XNZ4	W3WLB3	Uncharacterized protein.	Uncharacterized protein.	0.900
PFICI_01549	PFICI_00686	W3XR95	W3XLB2	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	SurE domain-containing protein.	0.900
PFICI_01549	PFICI_05697	W3XR95	W3XF56	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.	0.909
PFICI_01549	PFICI_06155	W3XR95	W3X4V3	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein; Belongs to the 5'-nucleotidase family.	0.904
PFICI_01549	PFICI_11454	W3XR95	W3WUR4	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Orotidine 5'-phosphate decarboxylase.	0.934
PFICI_01549	PFICI_12103	W3XR95	W3WV46	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uracil phosphoribosyltransferase.	0.933
PFICI_01549	PFICI_14547	W3XR95	W3WLB3	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uncharacterized protein.	0.929
PFICI_01549	PFICI_14552	W3XR95	W3WLB8	Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.	Uridine kinase; Belongs to the uridine kinase family.	0.933
PFICI_01750	PFICI_00829	W3XQX9	W3XNZ4	Cytosine deaminase.	Uncharacterized protein.	0.900