STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_13307AA_TRNA_LIGASE_II domain-containing protein. (598 aa)    
Predicted Functional Partners:
PFICI_12912
Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.916
PFICI_11611
Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.915
PFICI_10420
Lysine--tRNA ligase.
  
  
0.913
PFICI_05082
Proline--tRNA ligase.
  
 0.912
PFICI_09211
Leucine--tRNA ligase.
  
 0.905
PFICI_07235
Methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.903
PFICI_09025
Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.891
PFICI_12185
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.872
PFICI_12632
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.869
PFICI_01928
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.862
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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