STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_13578Uncharacterized protein. (604 aa)    
Predicted Functional Partners:
PFICI_02998
Phosphatidylinositol 3-kinase VPS34.
    
 0.998
PFICI_05469
Uncharacterized protein.
  
 
 0.997
PFICI_07169
Uncharacterized protein.
    
 0.936
PFICI_05023
Uncharacterized protein.
    
 0.936
PFICI_08444
Autophagy-related protein.
     
 0.767
PFICI_13325
Zn(2)-C6 fungal-type domain-containing protein.
     
 0.680
PFICI_07121
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 
 0.663
PFICI_09837
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
      
 0.655
PFICI_02906
Autophagy-related protein 3.
      
 0.654
PFICI_03495
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy.
      
 0.628
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.