STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_13737Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
PFICI_02417
Uncharacterized protein.
   
 
 0.958
PFICI_04533
U2 small nuclear ribonucleoprotein A.
   
 0.851
PFICI_06766
G-patch domain-containing protein.
 
 
 0.845
PFICI_08474
G-patch domain-containing protein.
   
 0.843
PFICI_05891
Sas10 domain-containing protein.
   
 0.834
PFICI_01774
Uncharacterized protein.
  
 
0.816
PFICI_04438
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.812
PFICI_11348
Small nuclear ribonucleoprotein F.
   
 0.808
PFICI_13748
WD_REPEATS_REGION domain-containing protein.
   
 0.807
PFICI_13239
Small nuclear ribonucleoprotein G.
   
 0.799
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.