STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_11785Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
PFICI_05054
Chorismate mutase.
 
 
 0.990
PFICI_02790
Prephenate dehydrogenase [NADP(+)]; Belongs to the prephenate/arogenate dehydrogenase family.
  
 
 0.987
PFICI_05171
Aminotran_1_2 domain-containing protein.
  
 
 0.981
PFICI_12893
Aspartate aminotransferase.
    
 0.946
PFICI_11932
Aminotran_1_2 domain-containing protein.
    
 0.946
PFICI_11952
Aminotran_1_2 domain-containing protein.
    
 0.946
PFICI_08398
Aspartate aminotransferase.
    
 0.946
PFICI_02156
Aspartate aminotransferase.
    
 0.946
PFICI_08638
Aminotran_1_2 domain-containing protein.
    
 0.944
PFICI_07657
Aminotran_1_2 domain-containing protein.
    
 0.944
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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