STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12360WD_REPEATS_REGION domain-containing protein. (982 aa)    
Predicted Functional Partners:
PFICI_01772
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.907
PFICI_06790
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.789
PFICI_06890
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.789
PFICI_07727
Exocyst complex component sec8.
   
 
 0.674
PFICI_04907
Uncharacterized protein.
   
  
 0.669
PFICI_04497
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.609
PFICI_05680
Exocyst complex component EXO84.
    
 
 0.589
PFICI_12941
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
   
 
 0.562
PFICI_10134
V-SNARE coiled-coil homology domain-containing protein.
    
 
 0.498
PFICI_09398
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.486
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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