STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12971Protein kinase domain-containing protein. (492 aa)    
Predicted Functional Partners:
PFICI_04638
Uncharacterized protein.
   
 
 0.759
PFICI_09915
Casein kinase I; Belongs to the protein kinase superfamily.
  
  
 0.716
PFICI_08997
RNA polymerase II holoenzyme cyclin-like subunit; Belongs to the cyclin family.
     
 0.702
PFICI_01448
Protein kinase domain-containing protein.
  
  
0.616
PFICI_07277
Uncharacterized protein.
   
  
 0.609
PFICI_08767
Uncharacterized protein.
  
  
0.604
PFICI_12501
Uncharacterized protein.
   
 
  0.597
PFICI_11446
CAP-Gly domain-containing protein.
     
 0.597
PFICI_06007
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
 
 
 
  0.587
PFICI_12042
Nuclear distribution protein.
     
 0.573
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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