STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12177Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (659 aa)    
Predicted Functional Partners:
PFICI_08397
Tryptophan synthase.
     
 0.670
PFICI_10135
Protein arg-6; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.544
PFICI_11951
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.486
PFICI_09734
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.486
PFICI_02540
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.486
PFICI_13304
Adenine phosphoribosyltransferase.
   
  
 0.429
PFICI_08251
FAD-binding PCMH-type domain-containing protein.
   
  
 0.429
PFICI_05465
Uncharacterized protein.
   
    0.400
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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