STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_10808VOC domain-containing protein. (221 aa)    
Predicted Functional Partners:
PFICI_12083
Lactamase_B domain-containing protein.
  
 
 0.963
PFICI_12001
DJ-1_PfpI domain-containing protein.
    
 0.925
PFICI_13973
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
  
 
0.908
PFICI_08397
Tryptophan synthase.
  
 0.828
PFICI_07198
PALP domain-containing protein.
   
 0.821
PFICI_13212
Threonine dehydratase.
   
 0.818
PFICI_12077
PALP domain-containing protein.
   
 0.817
PFICI_10776
Amine oxidase.
     
 0.806
PFICI_10804
D-ser_dehydrat domain-containing protein.
    
  0.800
PFICI_06923
D-ser_dehydrat domain-containing protein.
    
  0.800
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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