STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_11638ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (181 aa)    
Predicted Functional Partners:
PFICI_10352
Uncharacterized protein.
    
 0.856
PFICI_04477
TFCD_C domain-containing protein.
    
 0.856
PFICI_07325
GH16 domain-containing protein.
    
 0.739
PFICI_07700
GH16 domain-containing protein.
    
 0.739
PFICI_15015
Uncharacterized protein.
   
  
 0.689
PFICI_01781
CAP-Gly domain-containing protein.
    
 
 0.664
PFICI_01125
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 
 0.568
PFICI_04983
Uncharacterized protein.
      
 0.472
TIF35
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
 
 
    0.431
PFICI_12894
Uncharacterized protein.
    
 
 0.400
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.