STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_11392Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
PFICI_11393
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.556
PFICI_15216
Fumarylacetoacetase.
   
  
 0.464
PFICI_07676
Fumarylacetoacetase.
   
  
 0.464
PFICI_01704
Fumarylacetoacetase.
   
  
 0.464
PFICI_15239
Homogentisate 1,2-dioxygenase.
   
  
 0.423
PFICI_07598
Uncharacterized protein.
   
  
 0.423
PFICI_04610
Uncharacterized protein.
   
  
 0.423
PFICI_04567
Uncharacterized protein.
   
  
 0.423
PFICI_05682
Uncharacterized protein.
   
  
 0.423
PFICI_01705
Homogentisate 1,2-dioxygenase.
   
  
 0.423
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.