STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_09711Uncharacterized protein. (919 aa)    
Predicted Functional Partners:
PFICI_06868
RanBD1 domain-containing protein.
    
 0.690
PFICI_05254
PH domain-containing protein.
  
 
   0.485
PFICI_04499
Uncharacterized protein.
  
 
   0.483
PFICI_13804
Uncharacterized protein.
  
 
 
 0.480
PFICI_07909
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
  
 0.462
PFICI_05643
Uncharacterized protein.
  
     0.443
PFICI_11546
Uncharacterized protein.
  
 
 0.438
PFICI_06221
BTB domain-containing protein.
  
  
  0.433
PFICI_02732
Uncharacterized protein.
  
 
   0.425
PFICI_10257
BZIP domain-containing protein.
  
 
  0.415
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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