STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_10072Uncharacterized protein. (868 aa)    
Predicted Functional Partners:
PFICI_10260
Uncharacterized protein.
 
      0.755
PFICI_02489
Uncharacterized protein.
      
 0.611
PFICI_10076
J domain-containing protein.
 
      0.577
PFICI_07112
Uncharacterized protein.
    
 
 0.562
PFICI_01443
Uncharacterized protein.
   
  
 0.550
PFICI_12570
Uncharacterized protein.
   
  
 0.510
PFICI_13968
SH3 domain-containing protein.
    
 
 0.509
PFICI_00721
CBM1 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
 
 
  
 0.502
PFICI_10671
Uncharacterized protein.
   
  
 0.495
PFICI_02605
Chitin-binding type-1 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
   
  
 0.495
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.