STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_10650Uncharacterized protein. (1757 aa)    
Predicted Functional Partners:
PFICI_02066
Dopey_N domain-containing protein.
  
 
 0.989
PFICI_10395
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
 
      0.868
PFICI_01537
RIC1 domain-containing protein.
  
 
 0.766
PFICI_10951
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
   
 
 0.731
PFICI_11731
LIM zinc-binding domain-containing protein.
   
  
 0.656
PFICI_04483
Uncharacterized protein.
   
  
 0.656
PFICI_13355
Rab-GAP TBC domain-containing protein.
      
 0.611
PFICI_05293
SEC7 domain-containing protein.
   
 
 0.588
PFICI_07993
Uncharacterized protein.
    
 
 0.584
PFICI_12171
Cell division control protein 42.
    
 
 0.565
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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