STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_10606Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (494 aa)    
Predicted Functional Partners:
PFICI_14676
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.954
PFICI_07709
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.954
PFICI_01725
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.954
PFICI_11567
HpcH_HpaI domain-containing protein.
     
  0.905
PFICI_12191
HpcH_HpaI domain-containing protein.
     
  0.905
PFICI_02344
HpcH_HpaI domain-containing protein.
     
  0.905
PFICI_01188
HpcH_HpaI domain-containing protein.
     
  0.905
PFICI_02252
Aldedh domain-containing protein.
  
  
 
0.904
PFICI_13284
Succinate-semialdehyde dehydrogenase.
  
  
 
0.902
PFICI_10722
HpcH_HpaI domain-containing protein.
     
  0.900
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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