STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_08541MR_MLE domain-containing protein. (381 aa)    
Predicted Functional Partners:
PFICI_13374
F5/8 type C domain-containing protein.
     
  0.900
PFICI_12531
MR_MLE domain-containing protein.
  
  
 
0.900
PFICI_05496
Uncharacterized protein.
     
  0.900
PFICI_08546
Zn(2)-C6 fungal-type domain-containing protein.
   
  0.754
PFICI_12511
Zn(2)-C6 fungal-type domain-containing protein.
   
  0.750
PFICI_09412
Aminotran_5 domain-containing protein.
  
 
 0.494
PFICI_04195
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.435
PFICI_13767
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.418
PFICI_15139
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.412
PFICI_14922
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.412
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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