PFICI_09077 protein (Pestalotiopsis fici) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

co-expression

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Score

PFICI_09077

Uncharacterized protein. (557 aa)

Predicted Functional Partners:

PFICI_12226

0.997

PFICI_12968

0.894

PFICI_14549

0.888

PFICI_09941

0.851

PFICI_10740

0.815

PFICI_04288

0.719

PFICI_10712

0.678

PFICI_06233

0.658

LSM1

0.646

PFICI_13433

0.596

Your Current Organism:

Pestalotiopsis fici

NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	PFICI_04288	W3WY49	W3XAH4	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	PAT1 domain-containing protein.	0.996
LSM1	PFICI_06233	W3WY49	W3X7V3	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.471
LSM1	PFICI_09077	W3WY49	W3WZN8	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.646
LSM1	PFICI_09941	W3WY49	W3WVN6	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.618
LSM1	PFICI_10712	W3WY49	W3WSJ9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.980
LSM1	PFICI_10740	W3WY49	W3WVK0	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.790
LSM1	PFICI_12226	W3WY49	W3WQ75	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.968
LSM1	PFICI_12968	W3WY49	W3WQD9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Nudix hydrolase domain-containing protein.	0.919
LSM1	PFICI_13433	W3WY49	W3WMF9	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	NTP_transf_9 domain-containing protein.	0.667
LSM1	PFICI_14549	W3WY49	W3WI87	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	Uncharacterized protein.	0.820
PFICI_04288	LSM1	W3XAH4	W3WY49	PAT1 domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.996
PFICI_04288	PFICI_09077	W3XAH4	W3WZN8	PAT1 domain-containing protein.	Uncharacterized protein.	0.719
PFICI_04288	PFICI_09941	W3XAH4	W3WVN6	PAT1 domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.600
PFICI_04288	PFICI_10712	W3XAH4	W3WSJ9	PAT1 domain-containing protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.978
PFICI_04288	PFICI_10740	W3XAH4	W3WVK0	PAT1 domain-containing protein.	Uncharacterized protein.	0.973
PFICI_04288	PFICI_12226	W3XAH4	W3WQ75	PAT1 domain-containing protein.	ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.	0.998
PFICI_04288	PFICI_12968	W3XAH4	W3WQD9	PAT1 domain-containing protein.	Nudix hydrolase domain-containing protein.	0.997
PFICI_04288	PFICI_13433	W3XAH4	W3WMF9	PAT1 domain-containing protein.	NTP_transf_9 domain-containing protein.	0.881
PFICI_04288	PFICI_14549	W3XAH4	W3WI87	PAT1 domain-containing protein.	Uncharacterized protein.	0.976
PFICI_06233	LSM1	W3X7V3	W3WY49	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.471