STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_08925Carn_acyltransf domain-containing protein. (843 aa)    
Predicted Functional Partners:
PFICI_04890
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
  
0.952
PFICI_05207
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 
 0.804
PFICI_04938
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.788
PFICI_06435
Cytochrome b5 heme-binding domain-containing protein.
   
 
 0.724
PFICI_01958
CoA_binding domain-containing protein.
 
 
  
 0.651
PFICI_01984
Uncharacterized protein.
   
 
 0.646
PFICI_09085
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.625
PFICI_04716
Short/branched chain specific acyl-CoA dehydrogenase.
   
 
 0.606
PFICI_06362
Uncharacterized protein.
   
 
 0.557
PFICI_13044
Isocitrate lyase.
   
  
 0.541
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.