STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_07533DUF2040 domain-containing protein. (383 aa)    
Predicted Functional Partners:
PFICI_04624
Pre-mRNA-splicing factor cef-1.
   
   0.947
PFICI_13280
Isochorismatase domain-containing protein.
   
   0.788
PFICI_01398
PWI domain-containing protein.
     
 0.727
PFICI_02893
Pre-mRNA-splicing factor SLU7.
   
 
 0.680
PFICI_06187
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 0.670
PFICI_02326
Uncharacterized protein.
     
 0.669
PFICI_08096
Uncharacterized protein.
   
 
  0.651
PFICI_11690
MI domain-containing protein.
   
 
  0.647
PFICI_03387
RRM domain-containing protein.
   
 
  0.645
PFICI_14965
Uncharacterized protein.
   
 
  0.636
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.