STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_09530Argininosuccinate synthase. (422 aa)    
Predicted Functional Partners:
PFICI_11242
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.998
PFICI_00551
Carbamoyl-phosphate synthase arginine-specific large chain.
 
 
 0.998
PFICI_13205
Putative argininosuccinate lyase.
 
 0.995
PFICI_10135
Protein arg-6; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
  
 0.990
PFICI_05144
PyrABCN.
 
 
 0.983
PFICI_05206
Carbamoyl-phosphate synthase arginine-specific small chain.
  
 
 0.963
PFICI_12404
M20_dimer domain-containing protein.
  
 0.948
PFICI_02150
M20_dimer domain-containing protein.
  
 0.948
PFICI_03865
M20_dimer domain-containing protein.
  
 0.948
PFICI_00203
M20_dimer domain-containing protein.
  
 0.948
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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