STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04411Eukaryotic translation initiation factor 5A. (163 aa)    
Predicted Functional Partners:
PFICI_09276
Deoxyhypusine synthase.
   
 0.997
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.996
PFICI_02891
60S ribosomal protein L21-A.
  
 
 0.996
PFICI_13189
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.995
PFICI_07267
60S ribosomal protein L5.
   
 
 0.995
PFICI_01804
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.995
PFICI_08035
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.994
LIA1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
  
 0.994
PFICI_14915
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.993
PFICI_08732
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.993
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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