STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04228Uncharacterized protein. (741 aa)    
Predicted Functional Partners:
PFICI_02189
Uncharacterized protein.
   
 
 0.888
PFICI_11911
60S ribosomal protein L25-A.
  
 
 0.683
PFICI_01505
60S ribosomal protein L35.
  
 
 0.679
PFICI_07267
60S ribosomal protein L5.
  
 
 0.677
PFICI_05223
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.674
PFICI_05167
Uncharacterized protein.
 
    
 0.674
PFICI_12961
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
   0.672
PFICI_05867
60S ribosomal protein L7.
   
 
 0.670
PFICI_08811
60S ribosomal protein L26.
  
 
 0.667
PFICI_02417
Uncharacterized protein.
   
 
0.667
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.