STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04508CULLIN_2 domain-containing protein; Belongs to the cullin family. (766 aa)    
Predicted Functional Partners:
PFICI_12609
RING-box protein 1A.
    
 0.997
PFICI_03352
Uncharacterized protein.
    
 0.986
PFICI_10629
Uncharacterized protein.
    
 0.983
PFICI_02248
Uncharacterized protein.
   
 0.983
PFICI_12644
Uncharacterized protein.
    
 0.969
PFICI_00895
Ubiquitin-like protein 1.
    
 0.963
PFICI_12679
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.961
PFICI_04193
TIP120 domain-containing protein.
  
 0.961
PFICI_01192
Cell division control protein; Belongs to the CDC6/cdc18 family.
     
 0.934
PFICI_09554
F-box domain-containing protein.
    
 0.928
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.