STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_05204Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
PFICI_05153
Arf-GAP domain-containing protein.
   
 0.990
PFICI_10165
Arf-GAP domain-containing protein.
    
 0.936
PFICI_01813
Uncharacterized protein.
   
 0.912
PFICI_01363
Uncharacterized protein.
   
 0.906
PFICI_01502
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.906
PFICI_05687
SEC7 domain-containing protein.
    
 0.862
PFICI_04692
Uncharacterized protein.
   
 0.837
PFICI_05205
Electron transfer flavoprotein subunit beta.
 
 
    0.803
PFICI_04987
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.768
PFICI_08355
Uncharacterized protein.
    
 0.755
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (28%) [HD]