STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04672VASt domain-containing protein. (1193 aa)    
Predicted Functional Partners:
PFICI_04907
Uncharacterized protein.
      
 0.657
PFICI_01335
RRM domain-containing protein.
      
 0.610
PFICI_05361
Uncharacterized protein.
      
 0.595
PFICI_01199
EF-hand domain-containing protein.
   
 0.491
PFICI_13138
Ion_trans domain-containing protein.
    
 0.489
PFICI_11840
Uncharacterized protein.
    
 0.489
PFICI_12060
Uncharacterized protein.
    
 0.489
PFICI_11839
Uncharacterized protein.
    
 0.489
PFICI_10595
Uncharacterized protein.
    
 0.489
PFICI_08043
Uncharacterized protein.
    
 0.489
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.