STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_05599NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1045 aa)    
Predicted Functional Partners:
PFICI_11366
Glutamate synthase.
  
 0.991
PFICI_12365
Glutamine synthetase.
  
 
 0.976
PFICI_08218
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.966
PFICI_09106
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.953
PFICI_00143
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
 
 0.953
PFICI_13979
Putative alanine aminotransferase.
  
 
 0.944
PFICI_12893
Aspartate aminotransferase.
   
 0.944
PFICI_13766
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
 
 0.943
PFICI_10805
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
 
 0.943
PFICI_00462
Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.
  
 
 0.943
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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