STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_05784Uncharacterized protein. (950 aa)    
Predicted Functional Partners:
PFICI_12788
Uncharacterized protein.
   
 0.456
PFICI_11444
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.448
PFICI_05722
Uncharacterized protein; Belongs to the actin family.
    
 0.437
PFICI_03017
Putative ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.433
PFICI_06928
Actin-related protein 4; Belongs to the actin family.
   
 0.431
PFICI_10651
Ubiquitin-conjugating enzyme spm2.
    
 0.426
PFICI_11502
DNA-directed RNA polymerase.
   
 0.407
PFICI_14723
Uncharacterized protein.
   
 0.402
PFICI_12995
Uncharacterized protein.
   
 0.402
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.