STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_05313GYF domain-containing protein. (1403 aa)    
Predicted Functional Partners:
PFICI_12226
ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
    
 
 0.936
PFICI_07630
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.870
PFICI_05306
Aminotran_5 domain-containing protein.
 
      0.849
PFICI_04553
PKS_ER domain-containing protein.
 
      0.715
PFICI_02110
RING-type domain-containing protein.
    
 
 0.675
PFICI_14937
PKS_ER domain-containing protein.
 
      0.670
PFICI_05314
TPR_REGION domain-containing protein.
 
 
    0.646
PFICI_08182
Uncharacterized protein.
    
 
 0.617
PFICI_05728
Helicase mug81.
   
 
 0.495
PFICI_13032
Uncharacterized protein.
  
     0.456
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.