STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_02334Negative cofactor 2 complex subunit beta. (139 aa)    
Predicted Functional Partners:
PFICI_08030
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.995
PFICI_10296
TATA-box-binding protein.
    
 
 0.989
PFICI_05248
Uncharacterized protein.
    
 
 0.867
PFICI_01311
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.863
PFICI_06152
SGF29 C-terminal domain-containing protein.
    
 0.822
PFICI_06241
Uncharacterized protein.
    
 0.812
PFICI_10476
NAD-dependent protein deacetylase hst2-1.
 
      0.724
PFICI_04830
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.679
PFICI_11505
Uncharacterized protein.
   
  
 0.499
PFICI_14501
Uncharacterized protein.
    
 0.478
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.