STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_02704Uncharacterized protein. (269 aa)    
Predicted Functional Partners:
PFICI_11690
MI domain-containing protein.
   
   0.971
PFICI_02702
Uncharacterized protein.
 
      0.737
PFICI_05805
Pre-mRNA-processing-splicing factor 8.
    
 
 0.703
PFICI_02703
WD_REPEATS_REGION domain-containing protein.
 
      0.695
PFICI_12701
U-box domain-containing protein.
    
   0.675
PFICI_13748
WD_REPEATS_REGION domain-containing protein.
    
   0.660
PFICI_13660
U5 small nuclear ribonucleoprotein component.
    
   0.630
PFICI_11348
Small nuclear ribonucleoprotein F.
    
 
 0.617
PFICI_02020
Uncharacterized protein.
    
 
 0.610
PFICI_03746
Pre-mRNA-splicing factor syf-2.
   
   0.573
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.