STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_03020Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
PFICI_11048
Uncharacterized protein.
 
      0.883
PFICI_01141
ANK_REP_REGION domain-containing protein.
 
      0.859
PFICI_06075
Uncharacterized protein.
 
      0.846
PFICI_13502
Uncharacterized protein.
 
      0.842
PFICI_13899
Uncharacterized protein.
 
      0.814
PFICI_09691
ANK_REP_REGION domain-containing protein.
 
    
 0.743
PFICI_09425
Uncharacterized protein.
 
      0.734
PFICI_07803
Uncharacterized protein.
 
 
    0.635
PFICI_02272
ANK_REP_REGION domain-containing protein.
 
      0.604
PFICI_00241
ANK_REP_REGION domain-containing protein.
 
      0.598
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.